If you didn't manage to get the AppID's after submitting (which somehow I doubt you did), you may want to wait for the rejection letter so you can call about the specific app that got denied*. If you call recon now, and give your SS# to find the AppIDs, the CSR will likely view the fact that you applied for two at the same time to your detriment. Also, its not uncommon to be approved for one (or more) during a 2/3BM.
*Obviously, if you can find out the AppIDs another way, go right ahead.